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clusters:minerva:usedmodules_2018

Required modules

The following modules are installed on Minerva. Please add your username next to those that you require. This allows old modules to be removed.

If there's only one (compiler and) version, a module load software will select it without going into detail. Note that there are a few versions flagged as “(default)” in module av output that are not “highest” (e.g. python/2.7.12). This has to be adjusted! /intel-2016/ and /gcc/ entries are not shown.

table as of 2018-01-31

module (software[/compiler]/version) users
blas 3.6.0
Note: boost needs cleaning up. Upgrade to 1.66.0?
boost 1.61.0
boost icc16 1.61.0
boost impi icc16/1.61.0
boost openmpi 1.61.0
boost openmpi icc16/1.61.0
boost gcc-4.9.3 1.66.0
cairo gcc-4.9.3 1.12.18 splash/gcc-4.9.3/2.6.0
cairo gcc-4.9.3 1.14.12 splash/gcc-4.9.3/2.7.0
cmake 3.6.0
cython gcc-4.9.3 0.27.3 (*)
Note: fftw3 needs cleaning up. Drop 3.3.5?
fftw3 3.3.5
fftw3 gcc-4.9.3 3.3.6-pl1
fftw3 gcc-4.9.3 3.3.7
fftw3 openmpi 3.3.5
gcc 4.9.3 (*)
gdb 7.11
git 2.9.3
git-annex 5.20140421
Note: might be moved one level down, to git-annex/5.20140421
git-annex gcc-4.9.3 5.20140421
git-lfs 2.2.1
gsl gcc-4.9.3 1.5
gsl gcc-4.9.3 1.16
gsl gcc-4.9.3 2.1 hdf5/gcc-4.9.3/1.8.16
gsl gcc-4.9.3 2.4
h5py gcc-4.9.3 2.7.1
hdf5 gcc-4.9.3 1.8.16
hdf5 gcc-4.9.3 1.8.18 splash/gcc-4.9.3/2.6.0
hdf5 gcc-4.9.3 1.8.19 petsc/gcc-4.9.3/3.8.3
hdf5 gcc-4.9.3 1.10.1 splash/gcc-4.9.3/2.7.0 et al
hdf5 intel-2017.4 1.8.16
hdf5 intel-2017.4 1.8.19 petsc/intel-2017.4/3.8.3
hdf5 intel-2017.4 1.10.1 breaks petsc?
hwloc gcc-4.9.3 1.11.2
hwloc gcc-4.9.3 1.11.9
get rid of all intel/*/2016.1?
intel/advisor 2016.1/64/2016
intel/advisor 2017.4/64/2017.4
intel/compiler 2016.1/64/2016
intel/compiler 2017.4/64/2017.4 (*)
intel/daal 2016.1/64/2016
intel/daal 2017.4/64/2017.4
intel/impi 2016.1/64/5.1.2
intel/impi 2017.4/64/2017.4
intel/impi 2017.4.239/64/2017.4.239
intel/impi 2018.0/64/2018.0.128
intel/impi 2018.0.128/64/2018.0.128
intel/inspector 2016.1/64/2016
intel/inspector 2017.4/64/2017.4
intel/ipp 2016.1/64/2016
intel/ipp 2017.4/64/2017.4
intel/itac 2016.1/64/9.1.2.024
intel/itac 2017.4/64/2017.3.030
intel/mkl 2016.1/64/11.3
intel/mkl 2017.4/64/2017.4 (*)
intel/mpi is a symbolic link to intel/impi
intel/mpi 2016.1/64/5.1.2
intel/mpi 2017.4/64/2017.4
intel/mpi 2017.4.239/64/2017.4.239
intel/mpi 2018.0/64/2018.0.128
intel/mpi 2018.0.128/64/2018.0.128 (*)
intel/tbb 2016.1/64/2016
intel/tbb 2017.4/64/2017.4
intel/vtune 2016.1/64/2016
intel/vtune 2017.4/64/2017.4
jwm gcc-4.9.3 2.3.6
Drop old lapack?
lapack 3.6.1
lapack gcc-4.9.3 3.8.0 petsc/gcc-4.9.3/3.8.3
libpng gcc-4.9.3 1.6.28 splash/gcc-4.9.3/2.6.0
libpng gcc-4.9.3 1.6.34 splash/gcc-4.9.3/2.7.0
matplotlib py27 1.5.3
numpy py27 1.11.2 scipy/py27/0.18.1
numpy gcc-4.9.3 1.14.0 scipy/gcc-4.9.3/1.0.0
openblas 0.2.18 scipy/py27/0.18.1
openblas gcc-4.9.3 numpy/gcc-4.9.3/1.14.0, scipy/gcc-4.9.3/1.0.0
openmpi gcc-4.9.3 1.10.2 visit/gcc-4.9.3/*, petsc/gcc-4.9.3/3.8.3
openmpi gcc-4.9.3 3.0.0
openmpi intel-2016.1 1.10.2 get rid of 2016.1?
openmpi intel-2017.4 3.0.0 use Intel MPI instead?
petsc gcc-4.9.3 3.8.3
petsc intel-2017.4 3.8.2
petsc intel-2017.4 3.8.3
pixman gcc-4.9.3 0.32.6 splash/gcc-4.9.3/2.6.0
pixman gcc-4.9.3 0.34.0 splash/gcc-4.9.3/2.7.0
python 2.7.12 h5py/gcc-4.9.3/2.7.1
python gcc-4.9.3 2.7.14
python3 gcc-4.9.3 3.5.1
python3 gcc-4.9.3 3.5.4
python-setuptools gcc-4.9.3 38.2.4 (*)
scalapack openmpi 2.0.2
scipy py27 0.18.1
scipy gcc-4.9.3 1.0.0 boost/gcc-4.9.3/1.66.0
splash gcc-4.9.3 2.6.0
splash gcc-4.9.3 2.7.0
valgrind 3.11.0
visit gcc-4.9.3 2.11.0
visit gcc-4.9.3 2.11.0-new
visit gcc-4.9.3 2.12.3
vnc4 gcc-4.9.3 4.1.1+X4.3.0 (*)
wolfram/mathematica 10.4.1
wolfram/mathematica 11.1.1
Missing:
sudo any any johndoe

old table

2018-01-29: Cleanup, remove non-existing modules [sg]

clusters/minerva/usedmodules_2018.txt · Last modified: 2021/08/03 12:32 by Steffen Grunewald